Yum, tasty mutations...

MutationTaster - study a chromosomal position

MTQE documentation
NEVER press reload or F5 - unless you want to start from the very beginning.
input seems to be ok - now mapping the variant to the different transcripts...
found 4 transcript(s)...
Querying Taster for transcript #1: ENST00000546057
Querying Taster for transcript #2: ENST00000535250
Querying Taster for transcript #3: ENST00000328963
Querying Taster for transcript #4: ENST00000541446
MT speed 0 s - this script 5.674381 s

Results


genesymbolpredictionprobabilitymodelprediction
problem
splicingClinVaramino acid changesvariant typedbSNP IDprotein lengthfile
P2RX7polymorphism_automatic4.1639264432014e-05simple_aaeA258Tsingle base exchangers1718119show file
P2RX7polymorphism_automatic4.1639264432014e-05simple_aaeA178Tsingle base exchangers1718119show file
P2RX7polymorphism_automatic4.1639264432014e-05simple_aaeA59Tsingle base exchangers1718119show file
P2RX7polymorphism_automatic7.3312380448054e-05simple_aaeA348Tsingle base exchangers1718119show file

Taster files

Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999958360735568 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • known disease mutation at this position (HGMD CM098354)
  • protein features (might be) affected
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr12:121615103G>AN/A show variant in all transcripts   IGV
HGNC symbol P2RX7
Ensembl transcript ID ENST00000535250
Genbank transcript ID N/A
UniProt peptide Q99572
alteration type single base exchange
alteration region CDS
DNA changes c.772G>A
cDNA.1181G>A
g.44482G>A
AA changes A258T Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
258
frameshift no
known variant Reference ID: rs1718119
databasehomozygous (A/A)heterozygousallele carriers
1000G3089991307
ExAC84411588524326

known disease mutation at this position, please check HGMD for details (HGMD ID CM098354)
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)0.9571
1.1840.998
(flanking)4.0780.992
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Acc marginally decreased44478wt: 0.9748 / mu: 0.9635 (marginal change - not scored)wt: GCTTGTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTT
mu: GCTTGTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTT
 ccag|GCCG
distance from splice site 4
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      258IGSTLSYFGLAAVFIDFLIDTYSS
mutated  not conserved    258IGSTLSYFGLATVFIDFLIDTYS
Ptroglodytes  not conserved  ENSPTRG00000005554  348STLSYFGLATVFIDFLIDTYS
Mmulatta  not conserved  ENSMMUG00000006298  348STLSYFGLATVFIDFLINTYS
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000029468  348STLSYFGLATVCIDLLINTYS
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000042440  343IGSTLSYYAITTIFLDWLIGT--
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features
start (aa)end (aa)featuredetails 
47334TOPO_DOMExtracellular (Potential).lost
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 1518 / 1518
position (AA) of stopcodon in wt / mu AA sequence 506 / 506
position of stopcodon in wt / mu cDNA 1927 / 1927
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 410 / 410
chromosome 12
strand 1
last intron/exon boundary 1430
theoretical NMD boundary in CDS 970
length of CDS 1518
coding sequence (CDS) position 772
cDNA position
(for ins/del: last normal base / first normal base)
1181
gDNA position
(for ins/del: last normal base / first normal base)
44482
chromosomal position
(for ins/del: last normal base / first normal base)
121615103
original gDNA sequence snippet GTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTTCCTC
altered gDNA sequence snippet GTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTTCCTC
original cDNA sequence snippet TCTCCTACTTCGGTCTGGCCGCTGTGTTCATCGACTTCCTC
altered cDNA sequence snippet TCTCCTACTTCGGTCTGGCCACTGTGTTCATCGACTTCCTC
wildtype AA sequence MTPGDHSWGN SFFVMTNFLK TEGQEQRLCP EYPTRRTLCS SDRGCKKGWM DPQSKGIQTG
RCVVYEGNQK TCEVSAWCPI EAVEEAPRPA LLNSAENFTV LIKNNIDFPG HNYTTRNILP
GLNITCTFHK TQNPQCPIFR LGDIFRETGD NFSDVAIQGG IMGIEIYWDC NLDRWFHHCR
PKYSFRRLDD KTTNVSLYPG YNFRYAKYYK ENNVEKRTLI KVFGIRFDIL VFGTGGKFDI
IQLVVYIGST LSYFGLAAVF IDFLIDTYSS NCCRSHIYPW CKCCQPCVVN EYYYRKKCES
IVEPKPTLKY VSFVDESHIR MVNQQLLGRS LQDVKGQEVP RPAMDFTDLS RLPLALHDTP
PIPGQPEEIQ LLRKEATPRS RDSPVWCQCG SCLPSQLPES HRCLEELCCR KKPGACITTS
ELFRKLVLSR HVLQFLLLYQ EPLLALDVDS TNSRLRHCAY RCYATWRFGS QDMADFANLP
SCCRWRIRKE FPKSEGQYSG FKSPY*
mutated AA sequence MTPGDHSWGN SFFVMTNFLK TEGQEQRLCP EYPTRRTLCS SDRGCKKGWM DPQSKGIQTG
RCVVYEGNQK TCEVSAWCPI EAVEEAPRPA LLNSAENFTV LIKNNIDFPG HNYTTRNILP
GLNITCTFHK TQNPQCPIFR LGDIFRETGD NFSDVAIQGG IMGIEIYWDC NLDRWFHHCR
PKYSFRRLDD KTTNVSLYPG YNFRYAKYYK ENNVEKRTLI KVFGIRFDIL VFGTGGKFDI
IQLVVYIGST LSYFGLATVF IDFLIDTYSS NCCRSHIYPW CKCCQPCVVN EYYYRKKCES
IVEPKPTLKY VSFVDESHIR MVNQQLLGRS LQDVKGQEVP RPAMDFTDLS RLPLALHDTP
PIPGQPEEIQ LLRKEATPRS RDSPVWCQCG SCLPSQLPES HRCLEELCCR KKPGACITTS
ELFRKLVLSR HVLQFLLLYQ EPLLALDVDS TNSRLRHCAY RCYATWRFGS QDMADFANLP
SCCRWRIRKE FPKSEGQYSG FKSPY*
speed 0.98 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999958360735568 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • known disease mutation at this position (HGMD CM098354)
  • protein features (might be) affected
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr12:121615103G>AN/A show variant in all transcripts   IGV
HGNC symbol P2RX7
Ensembl transcript ID ENST00000328963
Genbank transcript ID N/A
UniProt peptide Q99572
alteration type single base exchange
alteration region CDS
DNA changes c.532G>A
cDNA.986G>A
g.44482G>A
AA changes A178T Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
178
frameshift no
known variant Reference ID: rs1718119
databasehomozygous (A/A)heterozygousallele carriers
1000G3089991307
ExAC84411588524326

known disease mutation at this position, please check HGMD for details (HGMD ID CM098354)
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)0.9571
1.1840.998
(flanking)4.0780.992
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Acc marginally decreased44478wt: 0.9748 / mu: 0.9635 (marginal change - not scored)wt: GCTTGTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTT
mu: GCTTGTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTT
 ccag|GCCG
distance from splice site 4
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      178IGSTLSYFGLAAVFIDFLIDTYSS
mutated  not conserved    178IGSTLSYFGLATVF
Ptroglodytes  not conserved  ENSPTRG00000005554  348IGSTLSYFGLATVFIDFLIDT
Mmulatta  not conserved  ENSMMUG00000006298  348IGSTLSYFGLATVFIDFLINT
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000029468  348IGSTLSYFGLATVCIDLLINT
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000042440  343IGSTLSYYAITTIFLDW
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features
start (aa)end (aa)featuredetails 
47334TOPO_DOMExtracellular (Potential).lost
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 1278 / 1278
position (AA) of stopcodon in wt / mu AA sequence 426 / 426
position of stopcodon in wt / mu cDNA 1732 / 1732
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 455 / 455
chromosome 12
strand 1
last intron/exon boundary 1235
theoretical NMD boundary in CDS 730
length of CDS 1278
coding sequence (CDS) position 532
cDNA position
(for ins/del: last normal base / first normal base)
986
gDNA position
(for ins/del: last normal base / first normal base)
44482
chromosomal position
(for ins/del: last normal base / first normal base)
121615103
original gDNA sequence snippet GTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTTCCTC
altered gDNA sequence snippet GTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTTCCTC
original cDNA sequence snippet TCTCCTACTTCGGTCTGGCCGCTGTGTTCATCGACTTCCTC
altered cDNA sequence snippet TCTCCTACTTCGGTCTGGCCACTGTGTTCATCGACTTCCTC
wildtype AA sequence MDGPAEQRPA LLNSAENFTV LIKNNIDFPG HNYTTRNILP GLNITCTFHK TQNPQCPIFR
LGDIFRETGD NFSDVAIQGG IMGIEIYWDC NLDRWFHHCR PKYSFRRLDD KTTNVSLYPG
YNFRYAKYYK ENNVEKRTLI KVFGIRFDIL VFGTGGKFDI IQLVVYIGST LSYFGLAAVF
IDFLIDTYSS NCCRSHIYPW CKCCQPCVVN EYYYRKKCES IVEPKPTLKY VSFVDESHIR
MVNQQLLGRS LQDVKGQEVP RPAMDFTDLS RLPLALHDTP PIPGQPEEIQ LLRKEATPRS
RDSPVWCQCG SCLPSQLPES HRCLEELCCR KKPGACITTS ELFRKLVLSR HVLQFLLLYQ
EPLLALDVDS TNSRLRHCAY RCYATWRFGS QDMADFANLP SCCRWRIRKE FPKSEGQYSG
FKSPY*
mutated AA sequence MDGPAEQRPA LLNSAENFTV LIKNNIDFPG HNYTTRNILP GLNITCTFHK TQNPQCPIFR
LGDIFRETGD NFSDVAIQGG IMGIEIYWDC NLDRWFHHCR PKYSFRRLDD KTTNVSLYPG
YNFRYAKYYK ENNVEKRTLI KVFGIRFDIL VFGTGGKFDI IQLVVYIGST LSYFGLATVF
IDFLIDTYSS NCCRSHIYPW CKCCQPCVVN EYYYRKKCES IVEPKPTLKY VSFVDESHIR
MVNQQLLGRS LQDVKGQEVP RPAMDFTDLS RLPLALHDTP PIPGQPEEIQ LLRKEATPRS
RDSPVWCQCG SCLPSQLPES HRCLEELCCR KKPGACITTS ELFRKLVLSR HVLQFLLLYQ
EPLLALDVDS TNSRLRHCAY RCYATWRFGS QDMADFANLP SCCRWRIRKE FPKSEGQYSG
FKSPY*
speed 1.20 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999958360735568 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • known disease mutation at this position (HGMD CM098354)
  • protein features (might be) affected
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr12:121615103G>AN/A show variant in all transcripts   IGV
HGNC symbol P2RX7
Ensembl transcript ID ENST00000541446
Genbank transcript ID N/A
UniProt peptide Q99572
alteration type single base exchange
alteration region CDS
DNA changes c.175G>A
cDNA.832G>A
g.44482G>A
AA changes A59T Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
59
frameshift no
known variant Reference ID: rs1718119
databasehomozygous (A/A)heterozygousallele carriers
1000G3089991307
ExAC84411588524326

known disease mutation at this position, please check HGMD for details (HGMD ID CM098354)
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)0.9571
1.1840.998
(flanking)4.0780.992
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Acc marginally decreased44478wt: 0.9748 / mu: 0.9635 (marginal change - not scored)wt: GCTTGTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTT
mu: GCTTGTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTT
 ccag|GCCG
distance from splice site 4
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      59IGSTLSYFGLAAVFIDFLIDTYSS
mutated  not conserved    59IGSTLSYFGLATVFIDFLIDTYS
Ptroglodytes  not conserved  ENSPTRG00000005554  348IGSTLSYFGLATVF
Mmulatta  not conserved  ENSMMUG00000006298  348IGSTLSYFGLATVF
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000029468  348IGSTLSYFGLATVC
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000042440  343IGSTLSYYAITTIFLD
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features
start (aa)end (aa)featuredetails 
47334TOPO_DOMExtracellular (Potential).lost
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 921 / 921
position (AA) of stopcodon in wt / mu AA sequence 307 / 307
position of stopcodon in wt / mu cDNA 1578 / 1578
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 658 / 658
chromosome 12
strand 1
last intron/exon boundary 1081
theoretical NMD boundary in CDS 373
length of CDS 921
coding sequence (CDS) position 175
cDNA position
(for ins/del: last normal base / first normal base)
832
gDNA position
(for ins/del: last normal base / first normal base)
44482
chromosomal position
(for ins/del: last normal base / first normal base)
121615103
original gDNA sequence snippet GTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTTCCTC
altered gDNA sequence snippet GTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTTCCTC
original cDNA sequence snippet TCTCCTACTTCGGTCTGGCCGCTGTGTTCATCGACTTCCTC
altered cDNA sequence snippet TCTCCTACTTCGGTCTGGCCACTGTGTTCATCGACTTCCTC
wildtype AA sequence MWQFRYAKYY KENNVEKRTL IKVFGIRFDI LVFGTGGKFD IIQLVVYIGS TLSYFGLAAV
FIDFLIDTYS SNCCRSHIYP WCKCCQPCVV NEYYYRKKCE SIVEPKPTLK YVSFVDESHI
RMVNQQLLGR SLQDVKGQEV PRPAMDFTDL SRLPLALHDT PPIPGQPEEI QLLRKEATPR
SRDSPVWCQC GSCLPSQLPE SHRCLEELCC RKKPGACITT SELFRKLVLS RHVLQFLLLY
QEPLLALDVD STNSRLRHCA YRCYATWRFG SQDMADFANL PSCCRWRIRK EFPKSEGQYS
GFKSPY*
mutated AA sequence MWQFRYAKYY KENNVEKRTL IKVFGIRFDI LVFGTGGKFD IIQLVVYIGS TLSYFGLATV
FIDFLIDTYS SNCCRSHIYP WCKCCQPCVV NEYYYRKKCE SIVEPKPTLK YVSFVDESHI
RMVNQQLLGR SLQDVKGQEV PRPAMDFTDL SRLPLALHDT PPIPGQPEEI QLLRKEATPR
SRDSPVWCQC GSCLPSQLPE SHRCLEELCC RKKPGACITT SELFRKLVLS RHVLQFLLLY
QEPLLALDVD STNSRLRHCA YRCYATWRFG SQDMADFANL PSCCRWRIRK EFPKSEGQYS
GFKSPY*
speed 1.19 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999926687619552 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • known disease mutation at this position (HGMD CM098354)
  • protein features (might be) affected
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr12:121615103G>AN/A show variant in all transcripts   IGV
HGNC symbol P2RX7
Ensembl transcript ID ENST00000546057
Genbank transcript ID NM_002562
UniProt peptide Q99572
alteration type single base exchange
alteration region CDS
DNA changes c.1042G>A
cDNA.1185G>A
g.44482G>A
AA changes A348T Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
348
frameshift no
known variant Reference ID: rs1718119
databasehomozygous (A/A)heterozygousallele carriers
1000G3089991307
ExAC84411588524326

known disease mutation at this position, please check HGMD for details (HGMD ID CM098354)
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)0.9571
1.1840.998
(flanking)4.0780.992
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Acc marginally decreased44478wt: 0.9748 / mu: 0.9635 (marginal change - not scored)wt: GCTTGTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTT
mu: GCTTGTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTT
 ccag|GCCG
distance from splice site 4
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      348IGSTLSYFGLAAVFIDFLIDTYSS
mutated  not conserved    348IGSTLSYFGLATVFIDFLIDTYS
Ptroglodytes  not conserved  ENSPTRG00000005554  348IGSTLSYFGLATVFIDFLIDTYS
Mmulatta  not conserved  ENSMMUG00000006298  348IGSTLSYFGLATVFIDFLINTYS
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000029468  348IGSTLSYFGLATVCIDLLINTYS
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000042440  343IGSTLSYYAITTIFLDWLIGT--
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features
start (aa)end (aa)featuredetails 
335355TRANSMEMHelical; Name=2; (Potential).lost
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 1788 / 1788
position (AA) of stopcodon in wt / mu AA sequence 596 / 596
position of stopcodon in wt / mu cDNA 1931 / 1931
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 144 / 144
chromosome 12
strand 1
last intron/exon boundary 1434
theoretical NMD boundary in CDS 1240
length of CDS 1788
coding sequence (CDS) position 1042
cDNA position
(for ins/del: last normal base / first normal base)
1185
gDNA position
(for ins/del: last normal base / first normal base)
44482
chromosomal position
(for ins/del: last normal base / first normal base)
121615103
original gDNA sequence snippet GTCTGCATTCTCCCCAGGCCGCTGTGTTCATCGACTTCCTC
altered gDNA sequence snippet GTCTGCATTCTCCCCAGGCCACTGTGTTCATCGACTTCCTC
original cDNA sequence snippet TCTCCTACTTCGGTCTGGCCGCTGTGTTCATCGACTTCCTC
altered cDNA sequence snippet TCTCCTACTTCGGTCTGGCCACTGTGTTCATCGACTTCCTC
wildtype AA sequence MPACCSCSDV FQYETNKVTR IQSMNYGTIK WFFHVIIFSY VCFALVSDKL YQRKEPVISS
VHTKVKGIAE VKEEIVENGV KKLVHSVFDT ADYTFPLQGN SFFVMTNFLK TEGQEQRLCP
EYPTRRTLCS SDRGCKKGWM DPQSKGIQTG RCVVYEGNQK TCEVSAWCPI EAVEEAPRPA
LLNSAENFTV LIKNNIDFPG HNYTTRNILP GLNITCTFHK TQNPQCPIFR LGDIFRETGD
NFSDVAIQGG IMGIEIYWDC NLDRWFHHCR PKYSFRRLDD KTTNVSLYPG YNFRYAKYYK
ENNVEKRTLI KVFGIRFDIL VFGTGGKFDI IQLVVYIGST LSYFGLAAVF IDFLIDTYSS
NCCRSHIYPW CKCCQPCVVN EYYYRKKCES IVEPKPTLKY VSFVDESHIR MVNQQLLGRS
LQDVKGQEVP RPAMDFTDLS RLPLALHDTP PIPGQPEEIQ LLRKEATPRS RDSPVWCQCG
SCLPSQLPES HRCLEELCCR KKPGACITTS ELFRKLVLSR HVLQFLLLYQ EPLLALDVDS
TNSRLRHCAY RCYATWRFGS QDMADFANLP SCCRWRIRKE FPKSEGQYSG FKSPY*
mutated AA sequence MPACCSCSDV FQYETNKVTR IQSMNYGTIK WFFHVIIFSY VCFALVSDKL YQRKEPVISS
VHTKVKGIAE VKEEIVENGV KKLVHSVFDT ADYTFPLQGN SFFVMTNFLK TEGQEQRLCP
EYPTRRTLCS SDRGCKKGWM DPQSKGIQTG RCVVYEGNQK TCEVSAWCPI EAVEEAPRPA
LLNSAENFTV LIKNNIDFPG HNYTTRNILP GLNITCTFHK TQNPQCPIFR LGDIFRETGD
NFSDVAIQGG IMGIEIYWDC NLDRWFHHCR PKYSFRRLDD KTTNVSLYPG YNFRYAKYYK
ENNVEKRTLI KVFGIRFDIL VFGTGGKFDI IQLVVYIGST LSYFGLATVF IDFLIDTYSS
NCCRSHIYPW CKCCQPCVVN EYYYRKKCES IVEPKPTLKY VSFVDESHIR MVNQQLLGRS
LQDVKGQEVP RPAMDFTDLS RLPLALHDTP PIPGQPEEIQ LLRKEATPRS RDSPVWCQCG
SCLPSQLPES HRCLEELCCR KKPGACITTS ELFRKLVLSR HVLQFLLLYQ EPLLALDVDS
TNSRLRHCAY RCYATWRFGS QDMADFANLP SCCRWRIRKE FPKSEGQYSG FKSPY*
speed 1.23 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table

Problems