Yum, tasty mutations...

MutationTaster - study a chromosomal position

MTQE documentation
NEVER press reload or F5 - unless you want to start from the very beginning.
input seems to be ok - now mapping the variant to the different transcripts...
found 2 transcript(s)...
Querying Taster for transcript #1: ENST00000345988
Querying Taster for transcript #2: ENST00000590782
MT speed 0 s - this script 2.901082 s

Results


genesymbolpredictionprobabilitymodelprediction
problem
splicingClinVaramino acid changesvariant typedbSNP IDprotein lengthfile
PPLpolymorphism_automatic0.999998439174039simple_aaeaffectedQ1573Esingle base exchangers2037912show file
PPLpolymorphism_automatic0.999998439174039simple_aaeaffectedQ1571Esingle base exchangers2037912show file

Taster files

Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 1.56082596073324e-06 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • protein features (might be) affected
  • splice site changes
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr16:4933939G>CN/A show variant in all transcripts   IGV
HGNC symbol PPL
Ensembl transcript ID ENST00000345988
Genbank transcript ID NM_002705
UniProt peptide O60437
alteration type single base exchange
alteration region CDS
DNA changes c.4717C>G
cDNA.4807C>G
g.76804C>G
AA changes Q1573E Score: 29 explain score(s)
position(s) of altered AA
if AA alteration in CDS
1573
frameshift no
known variant Reference ID: rs2037912
databasehomozygous (C/C)heterozygousallele carriers
1000G5419351476
ExAC16689-61116078
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)3.4840.997
6.2531
(flanking)0.6930.996
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Donor marginally increased76801wt: 0.8754 / mu: 0.9029 (marginal change - not scored)wt: TGGAGAGGCAAAACC
mu: TGGAGAGGGAAAACC
 GAGA|ggca
Donor gained768030.46mu: GAGAGGGAAAACCTG GAGG|gaaa
distance from splice site 1432
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      1573REENHKLQLERQNLQLETRRLQSE
mutated  all conserved    1573REENHKLQLERENLQLETRRLQS
Ptroglodytes  all identical  ENSPTRG00000007732  1461REENHKLQLERQNLQLETRRLQS
Mmulatta  all identical  ENSMMUG00000017822  1578REENHKLQLERQNLQLETRRLQS
Fcatus  all identical  ENSFCAG00000004571  1468REENHRLQLERQSLQLETRRL
Mmusculus  all identical  ENSMUSG00000039457  1571REENHKLQLERQNLQLETRRLQS
Ggallus  no homologue    
Trubripes  not conserved  ENSTRUG00000012163  311SRIQQENHRLQNDIRRLRS
Drerio  all identical  ENSDARG00000037898  1570RDESNRLQQENQRLQNELRKLQS
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  all identical  ENSXETG00000009137  1560MEKQNLQLETRHLHS
protein features
start (aa)end (aa)featuredetails 
8861645COILEDPotential.lost
15791579MOD_RESPhosphothreonine.might get lost (downstream of altered splice site)
16511685REPEATPlectin 1.might get lost (downstream of altered splice site)
16571657MOD_RESPhosphoserine (By similarity).might get lost (downstream of altered splice site)
16631663CONFLICTP -> L (in Ref. 1; AAC17738).might get lost (downstream of altered splice site)
17001735REPEATPlectin 2.might get lost (downstream of altered splice site)
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 5271 / 5271
position (AA) of stopcodon in wt / mu AA sequence 1757 / 1757
position of stopcodon in wt / mu cDNA 5361 / 5361
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 91 / 91
chromosome 16
strand -1
last intron/exon boundary 2698
theoretical NMD boundary in CDS 2557
length of CDS 5271
coding sequence (CDS) position 4717
cDNA position
(for ins/del: last normal base / first normal base)
4807
gDNA position
(for ins/del: last normal base / first normal base)
76804
chromosomal position
(for ins/del: last normal base / first normal base)
4933939
original gDNA sequence snippet ACAAATTACAGCTGGAGAGGCAAAACCTGCAGCTGGAGACC
altered gDNA sequence snippet ACAAATTACAGCTGGAGAGGGAAAACCTGCAGCTGGAGACC
original cDNA sequence snippet ACAAATTACAGCTGGAGAGGCAAAACCTGCAGCTGGAGACC
altered cDNA sequence snippet ACAAATTACAGCTGGAGAGGGAAAACCTGCAGCTGGAGACC
wildtype AA sequence MNSLFRKRNK GKYSPTVQTR SISNKELSEL IEQLQKNADQ VEKNIVDTEA KMQSDLARLQ
EGRQPEHRDV TLQKVLDSEK LLYVLEADAA IAKHMKHPQG DMIAEDIRQL KERVTNLRGK
HKQIYRLAVK EVDPQVNWAA LVEEKLDKLN NQSFGTDLPL VDHQVEEHNI FHNEVKAIGP
HLAKDGDKEQ NSELRAKYQK LLAASQARQQ HLSSLQDYMQ RCTNELYWLD QQAKGRMQYD
WSDRNLDYPS RRRQYENFIN RNLEAKEERI NKLHSEGDQL LAAEHPGRNS IEAHMEAVHA
DWKEYLNLLI CEESHLKYME DYHQFHEDVK DAQELLRKVD SDLNQKYGPD FKDRYQIELL
LRELDDQEKV LDKYEDVVQG LQKRGQQVVP LKYRRETPLK PIPVEALCDF EGEQGLISRG
YSYTLQKNNG ESWELMDSAG NKLIAPAVCF VIPPTDPEAL ALADSLGSQY RSVRQKAAGS
KRTLQQRYEV LKTENPGDAS DLQGRQLLAG LDKVASDLDR QEKAITGILR PPLEQGRAVQ
DSAERAKDLK NITNELLRIE PEKTRSTAEG EAFIQALPGS GTTPLLRTRV EDTNRKYEHL
LQLLDLAQEK VDVANRLEKS LQQSWELLAT HENHLNQDDT VPESSRVLDS KGQELAAMAC
ELQAQKSLLG EVEQNLQAAK QCSSTLASRF QEHCPDLERQ EAEVHKLGQR FNNLRQQVER
RAQSLQSAKA AYEHFHRGHD HVLQFLVSIP SYEPQETDSL SQMETKLKNQ KNLLDEIASR
EQEVQKICAN SQQYQQAVKD YELEAEKLRS LLDLENGRRS HVSKRARLQS PATKVKEEEA
ALAAKFTEVY AINRQRLQNL EFALNLLRQQ PEVEVTHETL QRNRPDSGVE EAWKIRKELD
EETERRRQLE NEVKSTQEEI WTLRNQGPQE SVVRKEVLKK VPDPVLEESF QQLQRTLAEE
QHKNQLLQEE LEALQLQLRA LEQETRDGGQ EYVVKEVLRI EPDRAQADEV LQLREELEAL
RRQKGAREAE VLLLQQRVAA LAEEKSRAQE KVTEKEVVKL QNDPQLEAEY QQLQEDHQRQ
DQLREKQEEE LSFLQDKLKR LEKERAMAEG KITVKEVLKV EKDAATEREV SDLTRQYEDE
AAKARASQRE KTELLRKIWA LEEENAKVVV QEKVREIVRP DPKAESEVAN LRLELVEQER
KYRGAEEQLR SYQSELEALR RRGPQVEVKE VTKEVIKYKT DPEMEKELQR LREEIVDKTR
LIERCDLEIY QLKKEIQALK DTKPQVQTKE VVQEILQFQE DPQTKEEVAS LRAKLSEEQK
KQVDLERERA SQEEQIARKE EELSRVKERV VQQEVVRYEE EPGLRAEASA FAESIDVELR
QIDKLRAELR RLQRRRTELE RQLEELERER QARREAEREV QRLQQRLAAL EQEEAEAREK
VTHTQKVVLQ QDPQQAREHA LLRLQLEEEQ HRRQLLEGEL ETLRRKLAAL EKAEVKEKVV
LSESVQVEKG DTEQEIQRLK SSLEEESRSK RELDVEVSRL EARLSELEFH NSKSSKELDF
LREENHKLQL ERQNLQLETR RLQSEINMAA TETRDLRNMT VADSGTNHDS RLWSLERELD
DLKRLSKDKD LEIDELQKRL GSVAVKREQR ENHLRRSIVV IHPDTGRELS PEEAHRAGLI
DWNMFVKLRS QECDWEEISV KGPNGESSVI HDRKSGKKFS IEEALQSGRL TPAQYDRYVN
KDMSIQELAV LVSGQK*
mutated AA sequence MNSLFRKRNK GKYSPTVQTR SISNKELSEL IEQLQKNADQ VEKNIVDTEA KMQSDLARLQ
EGRQPEHRDV TLQKVLDSEK LLYVLEADAA IAKHMKHPQG DMIAEDIRQL KERVTNLRGK
HKQIYRLAVK EVDPQVNWAA LVEEKLDKLN NQSFGTDLPL VDHQVEEHNI FHNEVKAIGP
HLAKDGDKEQ NSELRAKYQK LLAASQARQQ HLSSLQDYMQ RCTNELYWLD QQAKGRMQYD
WSDRNLDYPS RRRQYENFIN RNLEAKEERI NKLHSEGDQL LAAEHPGRNS IEAHMEAVHA
DWKEYLNLLI CEESHLKYME DYHQFHEDVK DAQELLRKVD SDLNQKYGPD FKDRYQIELL
LRELDDQEKV LDKYEDVVQG LQKRGQQVVP LKYRRETPLK PIPVEALCDF EGEQGLISRG
YSYTLQKNNG ESWELMDSAG NKLIAPAVCF VIPPTDPEAL ALADSLGSQY RSVRQKAAGS
KRTLQQRYEV LKTENPGDAS DLQGRQLLAG LDKVASDLDR QEKAITGILR PPLEQGRAVQ
DSAERAKDLK NITNELLRIE PEKTRSTAEG EAFIQALPGS GTTPLLRTRV EDTNRKYEHL
LQLLDLAQEK VDVANRLEKS LQQSWELLAT HENHLNQDDT VPESSRVLDS KGQELAAMAC
ELQAQKSLLG EVEQNLQAAK QCSSTLASRF QEHCPDLERQ EAEVHKLGQR FNNLRQQVER
RAQSLQSAKA AYEHFHRGHD HVLQFLVSIP SYEPQETDSL SQMETKLKNQ KNLLDEIASR
EQEVQKICAN SQQYQQAVKD YELEAEKLRS LLDLENGRRS HVSKRARLQS PATKVKEEEA
ALAAKFTEVY AINRQRLQNL EFALNLLRQQ PEVEVTHETL QRNRPDSGVE EAWKIRKELD
EETERRRQLE NEVKSTQEEI WTLRNQGPQE SVVRKEVLKK VPDPVLEESF QQLQRTLAEE
QHKNQLLQEE LEALQLQLRA LEQETRDGGQ EYVVKEVLRI EPDRAQADEV LQLREELEAL
RRQKGAREAE VLLLQQRVAA LAEEKSRAQE KVTEKEVVKL QNDPQLEAEY QQLQEDHQRQ
DQLREKQEEE LSFLQDKLKR LEKERAMAEG KITVKEVLKV EKDAATEREV SDLTRQYEDE
AAKARASQRE KTELLRKIWA LEEENAKVVV QEKVREIVRP DPKAESEVAN LRLELVEQER
KYRGAEEQLR SYQSELEALR RRGPQVEVKE VTKEVIKYKT DPEMEKELQR LREEIVDKTR
LIERCDLEIY QLKKEIQALK DTKPQVQTKE VVQEILQFQE DPQTKEEVAS LRAKLSEEQK
KQVDLERERA SQEEQIARKE EELSRVKERV VQQEVVRYEE EPGLRAEASA FAESIDVELR
QIDKLRAELR RLQRRRTELE RQLEELERER QARREAEREV QRLQQRLAAL EQEEAEAREK
VTHTQKVVLQ QDPQQAREHA LLRLQLEEEQ HRRQLLEGEL ETLRRKLAAL EKAEVKEKVV
LSESVQVEKG DTEQEIQRLK SSLEEESRSK RELDVEVSRL EARLSELEFH NSKSSKELDF
LREENHKLQL ERENLQLETR RLQSEINMAA TETRDLRNMT VADSGTNHDS RLWSLERELD
DLKRLSKDKD LEIDELQKRL GSVAVKREQR ENHLRRSIVV IHPDTGRELS PEEAHRAGLI
DWNMFVKLRS QECDWEEISV KGPNGESSVI HDRKSGKKFS IEEALQSGRL TPAQYDRYVN
KDMSIQELAV LVSGQK*
speed 0.46 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 1.56082596073324e-06 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • protein features (might be) affected
  • splice site changes
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr16:4933939G>CN/A show variant in all transcripts   IGV
HGNC symbol PPL
Ensembl transcript ID ENST00000590782
Genbank transcript ID N/A
UniProt peptide O60437
alteration type single base exchange
alteration region CDS
DNA changes c.4711C>G
cDNA.4730C>G
g.76804C>G
AA changes Q1571E Score: 29 explain score(s)
position(s) of altered AA
if AA alteration in CDS
1571
frameshift no
known variant Reference ID: rs2037912
databasehomozygous (C/C)heterozygousallele carriers
1000G5419351476
ExAC16689-61116078
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)3.4840.997
6.2531
(flanking)0.6930.996
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Donor marginally increased76801wt: 0.8754 / mu: 0.9029 (marginal change - not scored)wt: TGGAGAGGCAAAACC
mu: TGGAGAGGGAAAACC
 GAGA|ggca
Donor gained768030.46mu: GAGAGGGAAAACCTG GAGG|gaaa
distance from splice site 823
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      1571REENHKLQLERQNLQLETRRLQSE
mutated  all conserved    1571EENHKLQLERENLQLETRRLQS
Ptroglodytes  all identical  ENSPTRG00000007732  1461REENHKLQLERQNLQLETRRLQS
Mmulatta  all identical  ENSMMUG00000017822  1578REENHKLQLERQNLQLETRRLQS
Fcatus  all identical  ENSFCAG00000004571  1468REENHRLQLERQSLQLETRRL
Mmusculus  all identical  ENSMUSG00000039457  1571EENHKLQLERQNLQLETRRLQS
Ggallus  no homologue    
Trubripes  not conserved  ENSTRUG00000012163  311SRIQQENHRLQNDIRRLRS
Drerio  all identical  ENSDARG00000037898  1570DESNRLQQENQRLQNELRKLQS
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  all identical  ENSXETG00000009137  1560MEKQNLQLETRHLHS
protein features
start (aa)end (aa)featuredetails 
8861645COILEDPotential.lost
15791579MOD_RESPhosphothreonine.might get lost (downstream of altered splice site)
16511685REPEATPlectin 1.might get lost (downstream of altered splice site)
16571657MOD_RESPhosphoserine (By similarity).might get lost (downstream of altered splice site)
16631663CONFLICTP -> L (in Ref. 1; AAC17738).might get lost (downstream of altered splice site)
17001735REPEATPlectin 2.might get lost (downstream of altered splice site)
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 5265 / 5265
position (AA) of stopcodon in wt / mu AA sequence 1755 / 1755
position of stopcodon in wt / mu cDNA 5284 / 5284
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 20 / 20
chromosome 16
strand -1
last intron/exon boundary 5553
theoretical NMD boundary in CDS 5483
length of CDS 5265
coding sequence (CDS) position 4711
cDNA position
(for ins/del: last normal base / first normal base)
4730
gDNA position
(for ins/del: last normal base / first normal base)
76804
chromosomal position
(for ins/del: last normal base / first normal base)
4933939
original gDNA sequence snippet ACAAATTACAGCTGGAGAGGCAAAACCTGCAGCTGGAGACC
altered gDNA sequence snippet ACAAATTACAGCTGGAGAGGGAAAACCTGCAGCTGGAGACC
original cDNA sequence snippet ACAAATTACAGCTGGAGAGGCAAAACCTGCAGCTGGAGACC
altered cDNA sequence snippet ACAAATTACAGCTGGAGAGGGAAAACCTGCAGCTGGAGACC
wildtype AA sequence MNSLFRKRNK GKYSPTVQTR SISNKELSEL IEQLQKNADQ VEKNIVDTEA KMQSDLARLQ
EGRQPEHRDV TLQKVLDSEK LLYVLEADAA IAKHMKHPQG DMIAEDIRQL KERVTNLRGK
HKQIYRLAVK EVDPQVNWAA LVEEKLDKLN NQSFGTDLPL VDHQVEEHNI FHNEVKAIGP
HLAKDGDKNS ELRAKYQKLL AASQARQQHL SSLQDYMQRC TNELYWLDQQ AKGRMQYDWS
DRNLDYPSRR RQYENFINRN LEAKEERINK LHSEGDQLLA AEHPGRNSIE AHMEAVHADW
KEYLNLLICE ESHLKYMEDY HQFHEDVKDA QELLRKVDSD LNQKYGPDFK DRYQIELLLR
ELDDQEKVLD KYEDVVQGLQ KRGQQVVPLK YRRETPLKPI PVEALCDFEG EQGLISRGYS
YTLQKNNGES WELMDSAGNK LIAPAVCFVI PPTDPEALAL ADSLGSQYRS VRQKAAGSKR
TLQQRYEVLK TENPGDASDL QGRQLLAGLD KVASDLDRQE KAITGILRPP LEQGRAVQDS
AERAKDLKNI TNELLRIEPE KTRSTAEGEA FIQALPGSGT TPLLRTRVED TNRKYEHLLQ
LLDLAQEKVD VANRLEKSLQ QSWELLATHE NHLNQDDTVP ESSRVLDSKG QELAAMACEL
QAQKSLLGEV EQNLQAAKQC SSTLASRFQE HCPDLERQEA EVHKLGQRFN NLRQQVERRA
QSLQSAKAAY EHFHRGHDHV LQFLVSIPSY EPQETDSLSQ METKLKNQKN LLDEIASREQ
EVQKICANSQ QYQQAVKDYE LEAEKLRSLL DLENGRRSHV SKRARLQSPA TKVKEEEAAL
AAKFTEVYAI NRQRLQNLEF ALNLLRQQPE VEVTHETLQR NRPDSGVEEA WKIRKELDEE
TERRRQLENE VKSTQEEIWT LRNQGPQESV VRKEVLKKVP DPVLEESFQQ LQRTLAEEQH
KNQLLQEELE ALQLQLRALE QETRDGGQEY VVKEVLRIEP DRAQADEVLQ LREELEALRR
QKGAREAEVL LLQQRVAALA EEKSRAQEKV TEKEVVKLQN DPQLEAEYQQ LQEDHQRQDQ
LREKQEEELS FLQDKLKRLE KERAMAEGKI TVKEVLKVEK DAATEREVSD LTRQYEDEAA
KARASQREKT ELLRKIWALE EENAKVVVQE KVREIVRPDP KAESEVANLR LELVEQERKY
RGAEEQLRSY QSELEALRRR GPQVEVKEVT KEVIKYKTDP EMEKELQRLR EEIVDKTRLI
ERCDLEIYQL KKEIQALKDT KPQVQTKEVV QEILQFQEDP QTKEEVASLR AKLSEEQKKQ
VDLERERASQ EEQIARKEEE LSRVKERVVQ QEVVRYEEEP GLRAEASAFA ESIDVELRQI
DKLRAELRRL QRRRTELERQ LEELERERQA RREAEREVQR LQQRLAALEQ EEAEAREKVT
HTQKVVLQQD PQQAREHALL RLQLEEEQHR RQLLEGELET LRRKLAALEK AEVKEKVVLS
ESVQVEKGDT EQEIQRLKSS LEEESRSKRE LDVEVSRLEA RLSELEFHNS KSSKELDFLR
EENHKLQLER QNLQLETRRL QSEINMAATE TRDLRNMTVA DSGTNHDSRL WSLERELDDL
KRLSKDKDLE IDELQKRLGS VAVKREQREN HLRRSIVVIH PDTGRELSPE EAHRAGLIDW
NMFVKLRSQE CDWEEISVKG PNGESSVIHD RKSGKKFSIE EALQSGRLTP AQYDRYVNKD
MSIQELAVLV SGQK*
mutated AA sequence MNSLFRKRNK GKYSPTVQTR SISNKELSEL IEQLQKNADQ VEKNIVDTEA KMQSDLARLQ
EGRQPEHRDV TLQKVLDSEK LLYVLEADAA IAKHMKHPQG DMIAEDIRQL KERVTNLRGK
HKQIYRLAVK EVDPQVNWAA LVEEKLDKLN NQSFGTDLPL VDHQVEEHNI FHNEVKAIGP
HLAKDGDKNS ELRAKYQKLL AASQARQQHL SSLQDYMQRC TNELYWLDQQ AKGRMQYDWS
DRNLDYPSRR RQYENFINRN LEAKEERINK LHSEGDQLLA AEHPGRNSIE AHMEAVHADW
KEYLNLLICE ESHLKYMEDY HQFHEDVKDA QELLRKVDSD LNQKYGPDFK DRYQIELLLR
ELDDQEKVLD KYEDVVQGLQ KRGQQVVPLK YRRETPLKPI PVEALCDFEG EQGLISRGYS
YTLQKNNGES WELMDSAGNK LIAPAVCFVI PPTDPEALAL ADSLGSQYRS VRQKAAGSKR
TLQQRYEVLK TENPGDASDL QGRQLLAGLD KVASDLDRQE KAITGILRPP LEQGRAVQDS
AERAKDLKNI TNELLRIEPE KTRSTAEGEA FIQALPGSGT TPLLRTRVED TNRKYEHLLQ
LLDLAQEKVD VANRLEKSLQ QSWELLATHE NHLNQDDTVP ESSRVLDSKG QELAAMACEL
QAQKSLLGEV EQNLQAAKQC SSTLASRFQE HCPDLERQEA EVHKLGQRFN NLRQQVERRA
QSLQSAKAAY EHFHRGHDHV LQFLVSIPSY EPQETDSLSQ METKLKNQKN LLDEIASREQ
EVQKICANSQ QYQQAVKDYE LEAEKLRSLL DLENGRRSHV SKRARLQSPA TKVKEEEAAL
AAKFTEVYAI NRQRLQNLEF ALNLLRQQPE VEVTHETLQR NRPDSGVEEA WKIRKELDEE
TERRRQLENE VKSTQEEIWT LRNQGPQESV VRKEVLKKVP DPVLEESFQQ LQRTLAEEQH
KNQLLQEELE ALQLQLRALE QETRDGGQEY VVKEVLRIEP DRAQADEVLQ LREELEALRR
QKGAREAEVL LLQQRVAALA EEKSRAQEKV TEKEVVKLQN DPQLEAEYQQ LQEDHQRQDQ
LREKQEEELS FLQDKLKRLE KERAMAEGKI TVKEVLKVEK DAATEREVSD LTRQYEDEAA
KARASQREKT ELLRKIWALE EENAKVVVQE KVREIVRPDP KAESEVANLR LELVEQERKY
RGAEEQLRSY QSELEALRRR GPQVEVKEVT KEVIKYKTDP EMEKELQRLR EEIVDKTRLI
ERCDLEIYQL KKEIQALKDT KPQVQTKEVV QEILQFQEDP QTKEEVASLR AKLSEEQKKQ
VDLERERASQ EEQIARKEEE LSRVKERVVQ QEVVRYEEEP GLRAEASAFA ESIDVELRQI
DKLRAELRRL QRRRTELERQ LEELERERQA RREAEREVQR LQQRLAALEQ EEAEAREKVT
HTQKVVLQQD PQQAREHALL RLQLEEEQHR RQLLEGELET LRRKLAALEK AEVKEKVVLS
ESVQVEKGDT EQEIQRLKSS LEEESRSKRE LDVEVSRLEA RLSELEFHNS KSSKELDFLR
EENHKLQLER ENLQLETRRL QSEINMAATE TRDLRNMTVA DSGTNHDSRL WSLERELDDL
KRLSKDKDLE IDELQKRLGS VAVKREQREN HLRRSIVVIH PDTGRELSPE EAHRAGLIDW
NMFVKLRSQE CDWEEISVKG PNGESSVIHD RKSGKKFSIE EALQSGRLTP AQYDRYVNKD
MSIQELAVLV SGQK*
speed 0.46 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table

Problems