Yum, tasty mutations...

MutationTaster - study a chromosomal position

MTQE documentation
NEVER press reload or F5 - unless you want to start from the very beginning.
input seems to be ok - now mapping the variant to the different transcripts...
found 2 transcript(s)...
Querying Taster for transcript #1: ENST00000449707
Querying Taster for transcript #2: ENST00000411696
MT speed 3.05 s - this script 7.187342 s

Results


genesymbolpredictionprobabilitymodelprediction
problem
splicingClinVaramino acid changesvariant typedbSNP IDprotein lengthfile
ZNF142polymorphism_automatic1.47020173812962e-11simple_aaeaffectedL956Hsingle base exchangers3770213show file
ZNF142polymorphism_automatic1.47020173812962e-11simple_aaeaffectedL956Hsingle base exchangers3770213show file

Taster files

Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999999999985298 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • protein features (might be) affected
  • splice site changes
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr2:219508372A>TN/A show variant in all transcripts   IGV
HGNC symbol ZNF142
Ensembl transcript ID ENST00000449707
Genbank transcript ID NM_001105537
UniProt peptide P52746
alteration type single base exchange
alteration region CDS
DNA changes c.2867T>A
cDNA.3289T>A
g.16007T>A
AA changes L956H Score: 99 explain score(s)
position(s) of altered AA
if AA alteration in CDS
956
frameshift no
known variant Reference ID: rs3770213
databasehomozygous (T/T)heterozygousallele carriers
1000G162635797
ExAC65531966126214
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)-1.0140
-0.0930
(flanking)-0.2130
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Donor increased16009wt: 0.51 / mu: 0.58wt: CTCTTGCCACAGTCT
mu: CTCATGCCACAGTCT
 CTTG|ccac
Donor increased16001wt: 0.39 / mu: 0.52wt: AGAAGAGCCTCTTGC
mu: AGAAGAGCCTCATGC
 AAGA|gcct
Donor gained160030.31mu: AAGAGCCTCATGCCA GAGC|ctca
Donor gained160080.41mu: CCTCATGCCACAGTC TCAT|gcca
distance from splice site 1416
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      956LPREPEETEEPLATVSGSPVPPAG
mutated  not conserved    956LPREPEETEEPHATVS
Ptroglodytes  no homologue    
Mmulatta  all identical  ENSMMUG00000006737  949LPKEPEETEEPLATVS
Fcatus  not conserved  ENSFCAG00000004153  879PPREPEVEEPPGTCV--SLVPPA
Mmusculus  all identical  ENSMUSG00000026135  1158LPGGPG-VEEPLPTPSDFP----
Ggallus  not conserved  ENSGALG00000011393  1066-----------PWE
Trubripes  no homologue    
Drerio  all conserved  ENSDARG00000061373  858GSAEPQGSLSPIIT----DVIDE
Dmelanogaster  no alignment  FBgn0262160  n/a
Celegans  no homologue    
Xtropicalis  no homologue    
protein features
start (aa)end (aa)featuredetails 
11351158ZN_FINGC2H2-type 15.might get lost (downstream of altered splice site)
11711194ZN_FINGC2H2-type 16.might get lost (downstream of altered splice site)
12001222ZN_FINGC2H2-type 17.might get lost (downstream of altered splice site)
12281251ZN_FINGC2H2-type 18.might get lost (downstream of altered splice site)
12571280ZN_FINGC2H2-type 19.might get lost (downstream of altered splice site)
12861309ZN_FINGC2H2-type 20.might get lost (downstream of altered splice site)
13191319MOD_RESPhosphoserine.might get lost (downstream of altered splice site)
13281351ZN_FINGC2H2-type 21.might get lost (downstream of altered splice site)
13541377ZN_FINGC2H2-type 22.might get lost (downstream of altered splice site)
13801403ZN_FINGC2H2-type 23.might get lost (downstream of altered splice site)
14241446ZN_FINGC2H2-type 24.might get lost (downstream of altered splice site)
14521474ZN_FINGC2H2-type 25.might get lost (downstream of altered splice site)
14801502ZN_FINGC2H2-type 26.might get lost (downstream of altered splice site)
15081530ZN_FINGC2H2-type 27.might get lost (downstream of altered splice site)
15361559ZN_FINGC2H2-type 28.might get lost (downstream of altered splice site)
15651587ZN_FINGC2H2-type 29.might get lost (downstream of altered splice site)
15931615ZN_FINGC2H2-type 30.might get lost (downstream of altered splice site)
16211643ZN_FINGC2H2-type 31.might get lost (downstream of altered splice site)
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 5064 / 5064
position (AA) of stopcodon in wt / mu AA sequence 1688 / 1688
position of stopcodon in wt / mu cDNA 5486 / 5486
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 423 / 423
chromosome 2
strand -1
last intron/exon boundary 5017
theoretical NMD boundary in CDS 4544
length of CDS 5064
coding sequence (CDS) position 2867
cDNA position
(for ins/del: last normal base / first normal base)
3289
gDNA position
(for ins/del: last normal base / first normal base)
16007
chromosomal position
(for ins/del: last normal base / first normal base)
219508372
original gDNA sequence snippet AGAAGAAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC
altered gDNA sequence snippet AGAAGAAACAGAAGAGCCTCATGCCACAGTCTCTGGTTCCC
original cDNA sequence snippet AGAAGAAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC
altered cDNA sequence snippet AGAAGAAACAGAAGAGCCTCATGCCACAGTCTCTGGTTCCC
wildtype AA sequence MTDPLLDSQP ASSTGEMDGL CPELLLIPPP LSNRGILGPV QSPCPSRDPA PIPTEPGCLL
VEATATEEGP GNMEIIVETV AGTLTPGAPG ETPAPKLPPG EREPSQEAGT PLPGQETAEE
ENVEKEEKSD TQKDSQKAVD KGQGAQRLEG DVVSGTESLF KTHMCPECKR CFKKRTHLVE
HLHLHFPDPS LQCPNCQKFF TSKSKLKTHL LRELGEKAHH CPLCHYSAVE RNALNRHMAS
MHEDISNFYS DTYACPVCRE EFRLSQALKE HLKSHTAAAA AEPLPLRCFQ EGCSYAAPDR
KAFIKHLKET HGVRAVECRH HSCPMLFATA EAMEAHHKSH YAFHCPHCDF ACSNKHLFRK
HKKQGHPGSE ELRCTFCPFA TFNPVAYQDH VGKMHAHEKI HQCPECNFAT AHKRVLIRHM
LLHTGEKPHK CELCDFTCRD VSYLSKHMLT HSNTKDYMCT ECGYVTKWKH YLRVHMRKHA
GDLRYQCNQC SYRCHRADQL SSHKLRHQGK SLMCEVCAFA CKRKYELQKH MASQHHPGTP
APLYPCHYCS YQSRHKQAVL SHENCKHTRL REFHCALCDY RTFSNTTLLF HKRKAHGYVP
GDQAWQLRYA SQEPEGAMQG PTPPPDSEPS NQLSARPEGP GHEPGTVVDP SLDQALPEMS
EEVNTGRQEG SEAPHGGDLG GSPSPAEVEE GSCTLHLEAL GVELESVTEP PLEEVTETAP
MEFRPLGLEG PDGLEGPELS SFEGIGTSDL SAEENPLLEK PVSEPSTNPP SLEEAPNNWV
GTFKTTPPAE TAPLPPLPES ESLLKALRRQ DKEQAEALVL EGRVQMVVIQ GEGRAFRCPH
CPFITRREKA LNLHSRTGCQ GRREPLLCPE CGASFKQQRG LSTHLLKKCP VLLRKNKGLP
RPDSPIPLQP VLPGTQASED TESGKPPPAS QEAELLLPKD APLELPREPE ETEEPLATVS
GSPVPPAGNS LPTEAPKKHC FDPVPPAGNS SPTEAPKKHH LDPVPPAGNS SPTEALKKHR
FEQGKFHCNS CPFLCSRLSS ITSHVAEGCR GGRGGGGKRG TPQTQPDVSP LSNGDSAPPK
NGSTESSSGD GDTVLVQKQK GARFSCPTCP FSCQQERALR THQIRGCPLE ESGELHCSLC
PFTAPAATAL RLHQKRRHPT AAPARGPRPH LQCGDCGFTC KQSRCMQQHR RLKHEGVKPH
QCPFCDFSTT RRYRLEAHQS RHTGIGRIPC SSCPQTFGTN SKLRLHRLRV HDKTPTHFCP
LCDYSGYLRH DITRHVNSCH QGTPAFACSQ CEAQFSSETA LKQHALRRHP EPAQPAPGSP
AETTEGPLHC SRCGLLCPSP ASLRGHTRKQ HPRLECGACQ EAFPSRLALD EHRRQQHFSH
RCQLCDFAAR ERVGLVKHYL EQHEETSAAV AASDGDGDAG QPPLHCPFCD FTCRHQLVLD
HHVKGHGGTR LYKCTDCAYS TKNRQKITWH SRIHTGEKPY HCHLCPYACA DPSRLKYHMR
IHKEERKYLC PECGYKCKWV NQLKYHMTKH TGLKPYQCPE CEYCTNRADA LRVHQETRHR
EARAFMCEQC GKAFKTRFLL RTHLRKHSEA KPYVCNVCHR AFRWAAGLRH HALTHTDRHP
FFCRLCNYKA KQKFQVVKHV RRHHPDQADP NQGVGKDPTT PTVHLHDVQL EDPSPPAPAA
PHTGPEG*
mutated AA sequence MTDPLLDSQP ASSTGEMDGL CPELLLIPPP LSNRGILGPV QSPCPSRDPA PIPTEPGCLL
VEATATEEGP GNMEIIVETV AGTLTPGAPG ETPAPKLPPG EREPSQEAGT PLPGQETAEE
ENVEKEEKSD TQKDSQKAVD KGQGAQRLEG DVVSGTESLF KTHMCPECKR CFKKRTHLVE
HLHLHFPDPS LQCPNCQKFF TSKSKLKTHL LRELGEKAHH CPLCHYSAVE RNALNRHMAS
MHEDISNFYS DTYACPVCRE EFRLSQALKE HLKSHTAAAA AEPLPLRCFQ EGCSYAAPDR
KAFIKHLKET HGVRAVECRH HSCPMLFATA EAMEAHHKSH YAFHCPHCDF ACSNKHLFRK
HKKQGHPGSE ELRCTFCPFA TFNPVAYQDH VGKMHAHEKI HQCPECNFAT AHKRVLIRHM
LLHTGEKPHK CELCDFTCRD VSYLSKHMLT HSNTKDYMCT ECGYVTKWKH YLRVHMRKHA
GDLRYQCNQC SYRCHRADQL SSHKLRHQGK SLMCEVCAFA CKRKYELQKH MASQHHPGTP
APLYPCHYCS YQSRHKQAVL SHENCKHTRL REFHCALCDY RTFSNTTLLF HKRKAHGYVP
GDQAWQLRYA SQEPEGAMQG PTPPPDSEPS NQLSARPEGP GHEPGTVVDP SLDQALPEMS
EEVNTGRQEG SEAPHGGDLG GSPSPAEVEE GSCTLHLEAL GVELESVTEP PLEEVTETAP
MEFRPLGLEG PDGLEGPELS SFEGIGTSDL SAEENPLLEK PVSEPSTNPP SLEEAPNNWV
GTFKTTPPAE TAPLPPLPES ESLLKALRRQ DKEQAEALVL EGRVQMVVIQ GEGRAFRCPH
CPFITRREKA LNLHSRTGCQ GRREPLLCPE CGASFKQQRG LSTHLLKKCP VLLRKNKGLP
RPDSPIPLQP VLPGTQASED TESGKPPPAS QEAELLLPKD APLELPREPE ETEEPHATVS
GSPVPPAGNS LPTEAPKKHC FDPVPPAGNS SPTEAPKKHH LDPVPPAGNS SPTEALKKHR
FEQGKFHCNS CPFLCSRLSS ITSHVAEGCR GGRGGGGKRG TPQTQPDVSP LSNGDSAPPK
NGSTESSSGD GDTVLVQKQK GARFSCPTCP FSCQQERALR THQIRGCPLE ESGELHCSLC
PFTAPAATAL RLHQKRRHPT AAPARGPRPH LQCGDCGFTC KQSRCMQQHR RLKHEGVKPH
QCPFCDFSTT RRYRLEAHQS RHTGIGRIPC SSCPQTFGTN SKLRLHRLRV HDKTPTHFCP
LCDYSGYLRH DITRHVNSCH QGTPAFACSQ CEAQFSSETA LKQHALRRHP EPAQPAPGSP
AETTEGPLHC SRCGLLCPSP ASLRGHTRKQ HPRLECGACQ EAFPSRLALD EHRRQQHFSH
RCQLCDFAAR ERVGLVKHYL EQHEETSAAV AASDGDGDAG QPPLHCPFCD FTCRHQLVLD
HHVKGHGGTR LYKCTDCAYS TKNRQKITWH SRIHTGEKPY HCHLCPYACA DPSRLKYHMR
IHKEERKYLC PECGYKCKWV NQLKYHMTKH TGLKPYQCPE CEYCTNRADA LRVHQETRHR
EARAFMCEQC GKAFKTRFLL RTHLRKHSEA KPYVCNVCHR AFRWAAGLRH HALTHTDRHP
FFCRLCNYKA KQKFQVVKHV RRHHPDQADP NQGVGKDPTT PTVHLHDVQL EDPSPPAPAA
PHTGPEG*
speed 1.50 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999999999985298 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • protein features (might be) affected
  • splice site changes
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr2:219508372A>TN/A show variant in all transcripts   IGV
HGNC symbol ZNF142
Ensembl transcript ID ENST00000411696
Genbank transcript ID N/A
UniProt peptide P52746
alteration type single base exchange
alteration region CDS
DNA changes c.2867T>A
cDNA.3647T>A
g.16007T>A
AA changes L956H Score: 99 explain score(s)
position(s) of altered AA
if AA alteration in CDS
956
frameshift no
known variant Reference ID: rs3770213
databasehomozygous (T/T)heterozygousallele carriers
1000G162635797
ExAC65531966126214
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)-1.0140
-0.0930
(flanking)-0.2130
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites
effectgDNA positionscorewt detection sequence exon-intron border
Donor increased16009wt: 0.51 / mu: 0.58wt: CTCTTGCCACAGTCT
mu: CTCATGCCACAGTCT
 CTTG|ccac
Donor increased16001wt: 0.39 / mu: 0.52wt: AGAAGAGCCTCTTGC
mu: AGAAGAGCCTCATGC
 AAGA|gcct
Donor gained160030.31mu: AAGAGCCTCATGCCA GAGC|ctca
Donor gained160080.41mu: CCTCATGCCACAGTC TCAT|gcca
distance from splice site 1416
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      956LPREPEETEEPLATVSGSPVPPAG
mutated  not conserved    956LPREPEETEEPHATVS
Ptroglodytes  no homologue    
Mmulatta  all identical  ENSMMUG00000006737  949LPKEPEETEEPLATVS
Fcatus  not conserved  ENSFCAG00000004153  879PPREPEVEEPPGTCV--SLVPPA
Mmusculus  all identical  ENSMUSG00000026135  1158LPGGPG-VEEPLPTPSDFP----
Ggallus  not conserved  ENSGALG00000011393  1066-----------PWE
Trubripes  no homologue    
Drerio  all conserved  ENSDARG00000061373  858GSAEPQGSLSPIIT----DVIDE
Dmelanogaster  no alignment  FBgn0262160  n/a
Celegans  no homologue    
Xtropicalis  no homologue    
protein features
start (aa)end (aa)featuredetails 
11351158ZN_FINGC2H2-type 15.might get lost (downstream of altered splice site)
11711194ZN_FINGC2H2-type 16.might get lost (downstream of altered splice site)
12001222ZN_FINGC2H2-type 17.might get lost (downstream of altered splice site)
12281251ZN_FINGC2H2-type 18.might get lost (downstream of altered splice site)
12571280ZN_FINGC2H2-type 19.might get lost (downstream of altered splice site)
12861309ZN_FINGC2H2-type 20.might get lost (downstream of altered splice site)
13191319MOD_RESPhosphoserine.might get lost (downstream of altered splice site)
13281351ZN_FINGC2H2-type 21.might get lost (downstream of altered splice site)
13541377ZN_FINGC2H2-type 22.might get lost (downstream of altered splice site)
13801403ZN_FINGC2H2-type 23.might get lost (downstream of altered splice site)
14241446ZN_FINGC2H2-type 24.might get lost (downstream of altered splice site)
14521474ZN_FINGC2H2-type 25.might get lost (downstream of altered splice site)
14801502ZN_FINGC2H2-type 26.might get lost (downstream of altered splice site)
15081530ZN_FINGC2H2-type 27.might get lost (downstream of altered splice site)
15361559ZN_FINGC2H2-type 28.might get lost (downstream of altered splice site)
15651587ZN_FINGC2H2-type 29.might get lost (downstream of altered splice site)
15931615ZN_FINGC2H2-type 30.might get lost (downstream of altered splice site)
16211643ZN_FINGC2H2-type 31.might get lost (downstream of altered splice site)
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 5064 / 5064
position (AA) of stopcodon in wt / mu AA sequence 1688 / 1688
position of stopcodon in wt / mu cDNA 5844 / 5844
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 781 / 781
chromosome 2
strand -1
last intron/exon boundary 5375
theoretical NMD boundary in CDS 4544
length of CDS 5064
coding sequence (CDS) position 2867
cDNA position
(for ins/del: last normal base / first normal base)
3647
gDNA position
(for ins/del: last normal base / first normal base)
16007
chromosomal position
(for ins/del: last normal base / first normal base)
219508372
original gDNA sequence snippet AGAAGAAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC
altered gDNA sequence snippet AGAAGAAACAGAAGAGCCTCATGCCACAGTCTCTGGTTCCC
original cDNA sequence snippet AGAAGAAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC
altered cDNA sequence snippet AGAAGAAACAGAAGAGCCTCATGCCACAGTCTCTGGTTCCC
wildtype AA sequence MTDPLLDSQP ASSTGEMDGL CPELLLIPPP LSNRGILGPV QSPCPSRDPA PIPTEPGCLL
VEATATEEGP GNMEIIVETV AGTLTPGAPG ETPAPKLPPG EREPSQEAGT PLPGQETAEE
ENVEKEEKSD TQKDSQKAVD KGQGAQRLEG DVVSGTESLF KTHMCPECKR CFKKRTHLVE
HLHLHFPDPS LQCPNCQKFF TSKSKLKTHL LRELGEKAHH CPLCHYSAVE RNALNRHMAS
MHEDISNFYS DTYACPVCRE EFRLSQALKE HLKSHTAAAA AEPLPLRCFQ EGCSYAAPDR
KAFIKHLKET HGVRAVECRH HSCPMLFATA EAMEAHHKSH YAFHCPHCDF ACSNKHLFRK
HKKQGHPGSE ELRCTFCPFA TFNPVAYQDH VGKMHAHEKI HQCPECNFAT AHKRVLIRHM
LLHTGEKPHK CELCDFTCRD VSYLSKHMLT HSNTKDYMCT ECGYVTKWKH YLRVHMRKHA
GDLRYQCNQC SYRCHRADQL SSHKLRHQGK SLMCEVCAFA CKRKYELQKH MASQHHPGTP
APLYPCHYCS YQSRHKQAVL SHENCKHTRL REFHCALCDY RTFSNTTLLF HKRKAHGYVP
GDQAWQLRYA SQEPEGAMQG PTPPPDSEPS NQLSARPEGP GHEPGTVVDP SLDQALPEMS
EEVNTGRQEG SEAPHGGDLG GSPSPAEVEE GSCTLHLEAL GVELESVTEP PLEEVTETAP
MEFRPLGLEG PDGLEGPELS SFEGIGTSDL SAEENPLLEK PVSEPSTNPP SLEEAPNNWV
GTFKTTPPAE TAPLPPLPES ESLLKALRRQ DKEQAEALVL EGRVQMVVIQ GEGRAFRCPH
CPFITRREKA LNLHSRTGCQ GRREPLLCPE CGASFKQQRG LSTHLLKKCP VLLRKNKGLP
RPDSPIPLQP VLPGTQASED TESGKPPPAS QEAELLLPKD APLELPREPE ETEEPLATVS
GSPVPPAGNS LPTEAPKKHC FDPVPPAGNS SPTEAPKKHH LDPVPPAGNS SPTEALKKHR
FEQGKFHCNS CPFLCSRLSS ITSHVAEGCR GGRGGGGKRG TPQTQPDVSP LSNGDSAPPK
NGSTESSSGD GDTVLVQKQK GARFSCPTCP FSCQQERALR THQIRGCPLE ESGELHCSLC
PFTAPAATAL RLHQKRRHPT AAPARGPRPH LQCGDCGFTC KQSRCMQQHR RLKHEGVKPH
QCPFCDFSTT RRYRLEAHQS RHTGIGRIPC SSCPQTFGTN SKLRLHRLRV HDKTPTHFCP
LCDYSGYLRH DITRHVNSCH QGTPAFACSQ CEAQFSSETA LKQHALRRHP EPAQPAPGSP
AETTEGPLHC SRCGLLCPSP ASLRGHTRKQ HPRLECGACQ EAFPSRLALD EHRRQQHFSH
RCQLCDFAAR ERVGLVKHYL EQHEETSAAV AASDGDGDAG QPPLHCPFCD FTCRHQLVLD
HHVKGHGGTR LYKCTDCAYS TKNRQKITWH SRIHTGEKPY HCHLCPYACA DPSRLKYHMR
IHKEERKYLC PECGYKCKWV NQLKYHMTKH TGLKPYQCPE CEYCTNRADA LRVHQETRHR
EARAFMCEQC GKAFKTRFLL RTHLRKHSEA KPYVCNVCHR AFRWAAGLRH HALTHTDRHP
FFCRLCNYKA KQKFQVVKHV RRHHPDQADP NQGVGKDPTT PTVHLHDVQL EDPSPPAPAA
PHTGPEG*
mutated AA sequence MTDPLLDSQP ASSTGEMDGL CPELLLIPPP LSNRGILGPV QSPCPSRDPA PIPTEPGCLL
VEATATEEGP GNMEIIVETV AGTLTPGAPG ETPAPKLPPG EREPSQEAGT PLPGQETAEE
ENVEKEEKSD TQKDSQKAVD KGQGAQRLEG DVVSGTESLF KTHMCPECKR CFKKRTHLVE
HLHLHFPDPS LQCPNCQKFF TSKSKLKTHL LRELGEKAHH CPLCHYSAVE RNALNRHMAS
MHEDISNFYS DTYACPVCRE EFRLSQALKE HLKSHTAAAA AEPLPLRCFQ EGCSYAAPDR
KAFIKHLKET HGVRAVECRH HSCPMLFATA EAMEAHHKSH YAFHCPHCDF ACSNKHLFRK
HKKQGHPGSE ELRCTFCPFA TFNPVAYQDH VGKMHAHEKI HQCPECNFAT AHKRVLIRHM
LLHTGEKPHK CELCDFTCRD VSYLSKHMLT HSNTKDYMCT ECGYVTKWKH YLRVHMRKHA
GDLRYQCNQC SYRCHRADQL SSHKLRHQGK SLMCEVCAFA CKRKYELQKH MASQHHPGTP
APLYPCHYCS YQSRHKQAVL SHENCKHTRL REFHCALCDY RTFSNTTLLF HKRKAHGYVP
GDQAWQLRYA SQEPEGAMQG PTPPPDSEPS NQLSARPEGP GHEPGTVVDP SLDQALPEMS
EEVNTGRQEG SEAPHGGDLG GSPSPAEVEE GSCTLHLEAL GVELESVTEP PLEEVTETAP
MEFRPLGLEG PDGLEGPELS SFEGIGTSDL SAEENPLLEK PVSEPSTNPP SLEEAPNNWV
GTFKTTPPAE TAPLPPLPES ESLLKALRRQ DKEQAEALVL EGRVQMVVIQ GEGRAFRCPH
CPFITRREKA LNLHSRTGCQ GRREPLLCPE CGASFKQQRG LSTHLLKKCP VLLRKNKGLP
RPDSPIPLQP VLPGTQASED TESGKPPPAS QEAELLLPKD APLELPREPE ETEEPHATVS
GSPVPPAGNS LPTEAPKKHC FDPVPPAGNS SPTEAPKKHH LDPVPPAGNS SPTEALKKHR
FEQGKFHCNS CPFLCSRLSS ITSHVAEGCR GGRGGGGKRG TPQTQPDVSP LSNGDSAPPK
NGSTESSSGD GDTVLVQKQK GARFSCPTCP FSCQQERALR THQIRGCPLE ESGELHCSLC
PFTAPAATAL RLHQKRRHPT AAPARGPRPH LQCGDCGFTC KQSRCMQQHR RLKHEGVKPH
QCPFCDFSTT RRYRLEAHQS RHTGIGRIPC SSCPQTFGTN SKLRLHRLRV HDKTPTHFCP
LCDYSGYLRH DITRHVNSCH QGTPAFACSQ CEAQFSSETA LKQHALRRHP EPAQPAPGSP
AETTEGPLHC SRCGLLCPSP ASLRGHTRKQ HPRLECGACQ EAFPSRLALD EHRRQQHFSH
RCQLCDFAAR ERVGLVKHYL EQHEETSAAV AASDGDGDAG QPPLHCPFCD FTCRHQLVLD
HHVKGHGGTR LYKCTDCAYS TKNRQKITWH SRIHTGEKPY HCHLCPYACA DPSRLKYHMR
IHKEERKYLC PECGYKCKWV NQLKYHMTKH TGLKPYQCPE CEYCTNRADA LRVHQETRHR
EARAFMCEQC GKAFKTRFLL RTHLRKHSEA KPYVCNVCHR AFRWAAGLRH HALTHTDRHP
FFCRLCNYKA KQKFQVVKHV RRHHPDQADP NQGVGKDPTT PTVHLHDVQL EDPSPPAPAA
PHTGPEG*
speed 1.55 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table

Problems