Yum, tasty mutations...

MutationTaster - study a chromosomal position

MTQE documentation
NEVER press reload or F5 - unless you want to start from the very beginning.
input seems to be ok - now mapping the variant to the different transcripts...
found 4 transcript(s)...
Querying Taster for transcript #1: ENST00000402050
Querying Taster for transcript #2: ENST00000438376
Querying Taster for transcript #3: ENST00000325979
Querying Taster for transcript #4: ENST00000404984
MT speed 0 s - this script 5.50452 s

Results


genesymbolpredictionprobabilitymodelprediction
problem
splicingClinVaramino acid changesvariant typedbSNP IDprotein lengthfile
IQCEpolymorphism_automatic1.99840144432528e-15simple_aaeT580Asingle base exchangers2293407show file
IQCEpolymorphism_automatic1.99840144432528e-15simple_aaeT596Asingle base exchangers2293407show file
IQCEpolymorphism_automatic1.99840144432528e-15simple_aaeT531Asingle base exchangers2293407show file
IQCEpolymorphism_automatic1.99840144432528e-15simple_aaeT545Asingle base exchangers2293407show file

Taster files

Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999999999999998 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr7:2645552A>GN/A show variant in all transcripts   IGV
HGNC symbol IQCE
Ensembl transcript ID ENST00000438376
Genbank transcript ID NM_001100390
UniProt peptide Q6IPM2
alteration type single base exchange
alteration region CDS
DNA changes c.1738A>G
cDNA.1868A>G
g.46921A>G
AA changes T580A Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
580
frameshift no
known variant Reference ID: rs2293407
databasehomozygous (G/G)heterozygousallele carriers
1000G43412051639
ExAC74751781725292
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)-0.290
0.4380
(flanking)-0.050
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites no abrogation of potential splice sites
distance from splice site 43
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      580VPRVPSPIAQATGSPVQEEAIVII
mutated  not conserved    580VPRVPSPIAQAAGSPVQEEAIVI
Ptroglodytes  not conserved  ENSPTRG00000018866  596VPRVPSPIAQAAGSPV
Mmulatta  not conserved  ENSMMUG00000006458  596VPRVPSPIVQAEGSPA
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000036555  607APRVLSPISPAEENPTQEEAVI
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000089930  585LGTVPASMSQSGKSTQAVQE
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features no protein features affected
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 2040 / 2040
position (AA) of stopcodon in wt / mu AA sequence 680 / 680
position of stopcodon in wt / mu cDNA 2170 / 2170
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 131 / 131
chromosome 7
strand 1
last intron/exon boundary 2052
theoretical NMD boundary in CDS 1871
length of CDS 2040
coding sequence (CDS) position 1738
cDNA position
(for ins/del: last normal base / first normal base)
1868
gDNA position
(for ins/del: last normal base / first normal base)
46921
chromosomal position
(for ins/del: last normal base / first normal base)
2645552
original gDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered gDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
original cDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered cDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
wildtype AA sequence MFLGTGEPAL DTKAKRKAFH KPPPTSPKSP YLSKPRKVAS WRSLRTAGSM PLGGRASLTP
QKLWLGTAKP GSLTQALNSP LTWEHAWTGV PGGTPDCLTD TFRVKRPHLR RSASNGHVPG
TPVYREKEDM YDEIIELKKS LHVQKSDVDL MRTKLRRLEE ENSRKDRQIE QLLDPSRGTD
FVRTLAEKRP DASWVINGLK QRILKLEQQC KEKDGTISKL QTDMKTTNLE EMRIAMETYY
EEVHRLQTLL ASSETTGKKP LGEKKTGAKR QKKMGSALLS LSRSVQELTE ENQSLKEDLD
RVLSTSPTIS KTQGYVEWSK PRLLRRIVEL EKKLSVMESS KSHAAEPVRS HPPACLASSS
ALHRQPRGDR NKDHERLRGA VRDLKEERTA LQEQLLQRDL EVKQLLQAKA DLEKELECAR
EGEEERRERE EVLREEIQTL TSKLQELQEM KKEEKEDCPE VPHKAQELPA PTPSSRHCEQ
DWPPDSSEEG LPRPRSPCSD GRRDAAARVL QAQWKVYKHK KKKAVLDEAA VVLQAAFRGH
LTRTKLLASK AHGSEPPSVP GLPDQSSPVP RVPSPIAQAT GSPVQEEAIV IIQSALRAHL
ARARHSATGK RTTTAASTRR RSASATHGDA SSPPFLAALP DPSPSGPQAL APLPGDDVNS
DDSDDIVIAP SLPTKNFPV*
mutated AA sequence MFLGTGEPAL DTKAKRKAFH KPPPTSPKSP YLSKPRKVAS WRSLRTAGSM PLGGRASLTP
QKLWLGTAKP GSLTQALNSP LTWEHAWTGV PGGTPDCLTD TFRVKRPHLR RSASNGHVPG
TPVYREKEDM YDEIIELKKS LHVQKSDVDL MRTKLRRLEE ENSRKDRQIE QLLDPSRGTD
FVRTLAEKRP DASWVINGLK QRILKLEQQC KEKDGTISKL QTDMKTTNLE EMRIAMETYY
EEVHRLQTLL ASSETTGKKP LGEKKTGAKR QKKMGSALLS LSRSVQELTE ENQSLKEDLD
RVLSTSPTIS KTQGYVEWSK PRLLRRIVEL EKKLSVMESS KSHAAEPVRS HPPACLASSS
ALHRQPRGDR NKDHERLRGA VRDLKEERTA LQEQLLQRDL EVKQLLQAKA DLEKELECAR
EGEEERRERE EVLREEIQTL TSKLQELQEM KKEEKEDCPE VPHKAQELPA PTPSSRHCEQ
DWPPDSSEEG LPRPRSPCSD GRRDAAARVL QAQWKVYKHK KKKAVLDEAA VVLQAAFRGH
LTRTKLLASK AHGSEPPSVP GLPDQSSPVP RVPSPIAQAA GSPVQEEAIV IIQSALRAHL
ARARHSATGK RTTTAASTRR RSASATHGDA SSPPFLAALP DPSPSGPQAL APLPGDDVNS
DDSDDIVIAP SLPTKNFPV*
speed 1.26 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999999999999998 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr7:2645552A>GN/A show variant in all transcripts   IGV
HGNC symbol IQCE
Ensembl transcript ID ENST00000402050
Genbank transcript ID NM_152558
UniProt peptide Q6IPM2
alteration type single base exchange
alteration region CDS
DNA changes c.1786A>G
cDNA.1970A>G
g.46921A>G
AA changes T596A Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
596
frameshift no
known variant Reference ID: rs2293407
databasehomozygous (G/G)heterozygousallele carriers
1000G43412051639
ExAC74751781725292
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)-0.290
0.4380
(flanking)-0.050
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites no abrogation of potential splice sites
distance from splice site 43
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      596VPRVPSPIAQATGSPVQEEAIVII
mutated  not conserved    596VPRVPSPIAQAAGSPV
Ptroglodytes  not conserved  ENSPTRG00000018866  596VPRVPSPIAQAAGSPV
Mmulatta  not conserved  ENSMMUG00000006458  596VPRVPSPIVQAEGSPA
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000036555  610RVLSPISPAEENPTQEEAVIV
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000089930  571LGTVPASMSQSGKSTQAVQEEEVTL
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features no protein features affected
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 2088 / 2088
position (AA) of stopcodon in wt / mu AA sequence 696 / 696
position of stopcodon in wt / mu cDNA 2272 / 2272
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 185 / 185
chromosome 7
strand 1
last intron/exon boundary 2154
theoretical NMD boundary in CDS 1919
length of CDS 2088
coding sequence (CDS) position 1786
cDNA position
(for ins/del: last normal base / first normal base)
1970
gDNA position
(for ins/del: last normal base / first normal base)
46921
chromosomal position
(for ins/del: last normal base / first normal base)
2645552
original gDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered gDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
original cDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered cDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
wildtype AA sequence MFLGTGEPAL DTGDDSLSAV TFDSDVETKA KRKAFHKPPP TSPKSPYLSK PRKVASWRSL
RTAGSMPLGG RASLTPQKLW LGTAKPGSLT QALNSPLTWE HAWTGVPGGT PDCLTDTFRV
KRPHLRRSAS NGHVPGTPVY REKEDMYDEI IELKKSLHVQ KSDVDLMRTK LRRLEEENSR
KDRQIEQLLD PSRGTDFVRT LAEKRPDASW VINGLKQRIL KLEQQCKEKD GTISKLQTDM
KTTNLEEMRI AMETYYEEVH RLQTLLASSE TTGKKPLGEK KTGAKRQKKM GSALLSLSRS
VQELTEENQS LKEDLDRVLS TSPTISKTQG YVEWSKPRLL RRIVELEKKL SVMESSKSHA
AEPVRSHPPA CLASSSALHR QPRGDRNKDH ERLRGAVRDL KEERTALQEQ LLQRDLEVKQ
LLQAKADLEK ELECAREGEE ERREREEVLR EEIQTLTSKL QELQEMKKEE KEDCPEVPHK
AQELPAPTPS SRHCEQDWPP DSSEEGLPRP RSPCSDGRRD AAARVLQAQW KVYKHKKKKA
VLDEAAVVLQ AAFRGHLTRT KLLASKAHGS EPPSVPGLPD QSSPVPRVPS PIAQATGSPV
QEEAIVIIQS ALRAHLARAR HSATGKRTTT AASTRRRSAS ATHGDASSPP FLAALPDPSP
SGPQALAPLP GDDVNSDDSD DIVIAPSLPT KNFPV*
mutated AA sequence MFLGTGEPAL DTGDDSLSAV TFDSDVETKA KRKAFHKPPP TSPKSPYLSK PRKVASWRSL
RTAGSMPLGG RASLTPQKLW LGTAKPGSLT QALNSPLTWE HAWTGVPGGT PDCLTDTFRV
KRPHLRRSAS NGHVPGTPVY REKEDMYDEI IELKKSLHVQ KSDVDLMRTK LRRLEEENSR
KDRQIEQLLD PSRGTDFVRT LAEKRPDASW VINGLKQRIL KLEQQCKEKD GTISKLQTDM
KTTNLEEMRI AMETYYEEVH RLQTLLASSE TTGKKPLGEK KTGAKRQKKM GSALLSLSRS
VQELTEENQS LKEDLDRVLS TSPTISKTQG YVEWSKPRLL RRIVELEKKL SVMESSKSHA
AEPVRSHPPA CLASSSALHR QPRGDRNKDH ERLRGAVRDL KEERTALQEQ LLQRDLEVKQ
LLQAKADLEK ELECAREGEE ERREREEVLR EEIQTLTSKL QELQEMKKEE KEDCPEVPHK
AQELPAPTPS SRHCEQDWPP DSSEEGLPRP RSPCSDGRRD AAARVLQAQW KVYKHKKKKA
VLDEAAVVLQ AAFRGHLTRT KLLASKAHGS EPPSVPGLPD QSSPVPRVPS PIAQAAGSPV
QEEAIVIIQS ALRAHLARAR HSATGKRTTT AASTRRRSAS ATHGDASSPP FLAALPDPSP
SGPQALAPLP GDDVNSDDSD DIVIAPSLPT KNFPV*
speed 0.85 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999999999999998 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr7:2645552A>GN/A show variant in all transcripts   IGV
HGNC symbol IQCE
Ensembl transcript ID ENST00000325979
Genbank transcript ID N/A
UniProt peptide Q6IPM2
alteration type single base exchange
alteration region CDS
DNA changes c.1591A>G
cDNA.1877A>G
g.46921A>G
AA changes T531A Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
531
frameshift no
known variant Reference ID: rs2293407
databasehomozygous (G/G)heterozygousallele carriers
1000G43412051639
ExAC74751781725292
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)-0.290
0.4380
(flanking)-0.050
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites no abrogation of potential splice sites
distance from splice site 43
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      531VPRVPSPIAQATGSPVQEEAIVII
mutated  not conserved    531VPRVPSPIAQAAGSPVQEEAI
Ptroglodytes  not conserved  ENSPTRG00000018866  596VPRVPSPIAQAAGSPVQEEAI
Mmulatta  not conserved  ENSMMUG00000006458  596VPRVPSPIVQAEGSPAQEEAI
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000036555  610ISPAEENPTQEEAVIV
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000089930  573LGTVPASMSQSGKSTQAVQEEEVTL
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features no protein features affected
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 1893 / 1893
position (AA) of stopcodon in wt / mu AA sequence 631 / 631
position of stopcodon in wt / mu cDNA 2179 / 2179
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 287 / 287
chromosome 7
strand 1
last intron/exon boundary 2061
theoretical NMD boundary in CDS 1724
length of CDS 1893
coding sequence (CDS) position 1591
cDNA position
(for ins/del: last normal base / first normal base)
1877
gDNA position
(for ins/del: last normal base / first normal base)
46921
chromosomal position
(for ins/del: last normal base / first normal base)
2645552
original gDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered gDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
original cDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered cDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
wildtype AA sequence MPLGGRASLT PQKLWLGTAK PGSLTQALNS PLTWEHAWTG VPGGTPDCLT DTFRVKRPHL
RRSASNGHVP GTPVYREKED MYDEIIELKK SLHVQKSDVD LMRTKLRRLE EENSRKDRQI
EQLLDPSRGT DFVRTLAEKR PDASWVINGL KQRILKLEQQ CKEKDGTISK LQTDMKTTNL
EEMRIAMETY YEEVHRLQTL LASSETTGKK PLGEKKTGAK RQKKMGSALL SLSRSVQELT
EENQSLKEDL DRVLSTSPTI SKTQGYVEWS KPRLLRRIVE LEKKLSVMES SKSHAAEPVR
SHPPACLASS SALHRQPRGD RNKDHERLRG AVRDLKEERT ALQEQLLQRD LEVKQLLQAK
ADLEKELECA REGEEERRER EEVLREEIQT LTSKLQELQE MKKEEKEDCP EVPHKAQELP
APTPSSRHCE QDWPPDSSEE GLPRPRSPCS DGRRDAAARV LQAQWKVYKH KKKKAVLDEA
AVVLQAAFRG HLTRTKLLAS KAHGSEPPSV PGLPDQSSPV PRVPSPIAQA TGSPVQEEAI
VIIQSALRAH LARARHSATG KRTTTAASTR RRSASATHGD ASSPPFLAAL PDPSPSGPQA
LAPLPGDDVN SDDSDDIVIA PSLPTKNFPV *
mutated AA sequence MPLGGRASLT PQKLWLGTAK PGSLTQALNS PLTWEHAWTG VPGGTPDCLT DTFRVKRPHL
RRSASNGHVP GTPVYREKED MYDEIIELKK SLHVQKSDVD LMRTKLRRLE EENSRKDRQI
EQLLDPSRGT DFVRTLAEKR PDASWVINGL KQRILKLEQQ CKEKDGTISK LQTDMKTTNL
EEMRIAMETY YEEVHRLQTL LASSETTGKK PLGEKKTGAK RQKKMGSALL SLSRSVQELT
EENQSLKEDL DRVLSTSPTI SKTQGYVEWS KPRLLRRIVE LEKKLSVMES SKSHAAEPVR
SHPPACLASS SALHRQPRGD RNKDHERLRG AVRDLKEERT ALQEQLLQRD LEVKQLLQAK
ADLEKELECA REGEEERRER EEVLREEIQT LTSKLQELQE MKKEEKEDCP EVPHKAQELP
APTPSSRHCE QDWPPDSSEE GLPRPRSPCS DGRRDAAARV LQAQWKVYKH KKKKAVLDEA
AVVLQAAFRG HLTRTKLLAS KAHGSEPPSV PGLPDQSSPV PRVPSPIAQA AGSPVQEEAI
VIIQSALRAH LARARHSATG KRTTTAASTR RRSASATHGD ASSPPFLAAL PDPSPSGPQA
LAPLPGDDVN SDDSDDIVIA PSLPTKNFPV *
speed 0.98 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
back to results table
Yum, tasty mutations...

mutation t@sting

documentation

Prediction

polymorphism

Model: simple_aae, prob: 0.999999999999998 (classification due to TGP/ExAC, real probability is shown anyway)      (explain)
Summary
  • amino acid sequence changed
  • homozygous in TGP or ExAC
  • protein features (might be) affected
hyperlink
analysed issue analysis result
name of alteration no title
alteration (phys. location) chr7:2645552A>GN/A show variant in all transcripts   IGV
HGNC symbol IQCE
Ensembl transcript ID ENST00000404984
Genbank transcript ID N/A
UniProt peptide Q6IPM2
alteration type single base exchange
alteration region CDS
DNA changes c.1633A>G
cDNA.1817A>G
g.46921A>G
AA changes T545A Score: 58 explain score(s)
position(s) of altered AA
if AA alteration in CDS
545
frameshift no
known variant Reference ID: rs2293407
databasehomozygous (G/G)heterozygousallele carriers
1000G43412051639
ExAC74751781725292
regulatory features H3K36me3, Histone, Histone 3 Lysine 36 Tri-Methylation
phyloP / phastCons
PhyloPPhastCons
(flanking)-0.290
0.4380
(flanking)-0.050
explain score(s) and/or inspect your position(s) in in UCSC Genome Browser
splice sites no abrogation of potential splice sites
distance from splice site 43
Kozak consensus sequence altered? N/A
conservation
protein level for non-synonymous changes
speciesmatchgeneaaalignment
Human      545VPRVPSPIAQATGSPVQEEAIVII
mutated  not conserved    545IAQAAGSPVQEEAIVI
Ptroglodytes  not conserved  ENSPTRG00000018866  596VPRVPSPIAQAAGSPVQEEAIVI
Mmulatta  not conserved  ENSMMUG00000006458  596VPRVPSPIVQAEGSPAQEEAIVI
Fcatus  no homologue    
Mmusculus  not conserved  ENSMUSG00000036555  610EENPTQEEAVIV
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  not conserved  ENSDARG00000089930  573LGTVPASMSQSGKSTQAVQEEEVTL
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
protein features
start (aa)end (aa)featuredetails 
542571DOMAINIQ 1.lost
length of protein normal
AA sequence altered yes
position of stopcodon in wt / mu CDS 1935 / 1935
position (AA) of stopcodon in wt / mu AA sequence 645 / 645
position of stopcodon in wt / mu cDNA 2119 / 2119
poly(A) signal N/A
conservation
nucleotide level for all changes - no scoring up to now
N/A
position of start ATG in wt / mu cDNA 185 / 185
chromosome 7
strand 1
last intron/exon boundary 2001
theoretical NMD boundary in CDS 1766
length of CDS 1935
coding sequence (CDS) position 1633
cDNA position
(for ins/del: last normal base / first normal base)
1817
gDNA position
(for ins/del: last normal base / first normal base)
46921
chromosomal position
(for ins/del: last normal base / first normal base)
2645552
original gDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered gDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
original cDNA sequence snippet CGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAG
altered cDNA sequence snippet CGAGCCCCATCGCCCAGGCCGCGGGCAGCCCTGTGCAGGAG
wildtype AA sequence MFLGTGEPAL DTSHLISLSR ASLTPQKLWL GTAKPGSLTQ ALNSPLTWEH AWTGVPGGTP
DCLTDTFRVK RPHLRRSASN GHVPGTPVYR EKEDMYDEII ELKKSLHVQK SDVDLMRTKL
RRLEEENSRK DRQIEQLLDP SRGTDFVRTL AEKRPDASWV INGLKQRILK LEQQCKEKDG
TISKLQTDMK TTNLEEMRIA METYYEEVHR LQTLLASSET TGKKPLGEKK TGAKRQKKMG
SALLSLSRSV QELTEENQSL KEDLDRVLST SPTISKTQGY VEWSKPRLLR RIVELEKKLS
VMESSKSHAA EPVRSHPPAC LASSSALHRQ PRGDRNKDHE RLRGAVRDLK EERTALQEQL
LQRDLEVKQL LQAKADLEKE LECAREGEEE RREREEVLRE EIQTLTSKLQ ELQEMKKEEK
EDCPEVPHKA QELPAPTPSS RHCEQDWPPD SSEEGLPRPR SPCSDGRRDA AARVLQAQWK
VYKHKKKKAV LDEAAVVLQA AFRGHLTRTK LLASKAHGSE PPSVPGLPDQ SSPVPRVPSP
IAQATGSPVQ EEAIVIIQSA LRAHLARARH SATGKRTTTA ASTRRRSASA THGDASSPPF
LAALPDPSPS GPQALAPLPG DDVNSDDSDD IVIAPSLPTK NFPV*
mutated AA sequence MFLGTGEPAL DTSHLISLSR ASLTPQKLWL GTAKPGSLTQ ALNSPLTWEH AWTGVPGGTP
DCLTDTFRVK RPHLRRSASN GHVPGTPVYR EKEDMYDEII ELKKSLHVQK SDVDLMRTKL
RRLEEENSRK DRQIEQLLDP SRGTDFVRTL AEKRPDASWV INGLKQRILK LEQQCKEKDG
TISKLQTDMK TTNLEEMRIA METYYEEVHR LQTLLASSET TGKKPLGEKK TGAKRQKKMG
SALLSLSRSV QELTEENQSL KEDLDRVLST SPTISKTQGY VEWSKPRLLR RIVELEKKLS
VMESSKSHAA EPVRSHPPAC LASSSALHRQ PRGDRNKDHE RLRGAVRDLK EERTALQEQL
LQRDLEVKQL LQAKADLEKE LECAREGEEE RREREEVLRE EIQTLTSKLQ ELQEMKKEEK
EDCPEVPHKA QELPAPTPSS RHCEQDWPPD SSEEGLPRPR SPCSDGRRDA AARVLQAQWK
VYKHKKKKAV LDEAAVVLQA AFRGHLTRTK LLASKAHGSE PPSVPGLPDQ SSPVPRVPSP
IAQAAGSPVQ EEAIVIIQSA LRAHLARARH SATGKRTTTA ASTRRRSASA THGDASSPPF
LAALPDPSPS GPQALAPLPG DDVNSDDSDD IVIAPSLPTK NFPV*
speed 1.26 s
All positions are in basepairs (bp) if not explicitly stated differently.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project
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